eLife

TopoMetry systematically learns and evaluates the latent geometry of single-cell data

A framework for analyzing single-cell genomics data, in which geometrical properties are harnessed to obtain insights on cellular diversity, including precise clustering, clear visualizations, and ...

Purine-heavy DNA sequences protect Bacillus subtilis genes from Rho termination

In the study of bacteria, a longstanding dogma has held that two molecular machines—RNA polymerase, which leads the way in transcribing DNA into RNA, and ribosomes, which bring up the rear translating ...
Bleeping Computer

ChocoPoc malware delivered via trojanized exploits on GitHub

Multiple weaponized proof-of-concept (PoC) exploits on GitHub delivered a Python-based remote access trojan (RAT) called ChocoPoC that can execute commands and steal sensitive data. However, ChocoPoC ...

Malicious PyPI packages give hackers control of Telegram bot servers

A campaign active since last November has been targeting Python developers building Telegram bots with trojanized Pyrogram ...

Computer scientists develop a new AI tool that rivals AlphaFold 3 in mapping RNA

The same family of artificial intelligence that powers today's image generators is now being aimed at one of biology's ...
Frontiers

RNA-Seq Analysis: Methods, Applications and Challenges

RNA-seq has represented a pivotal breakthrough in transcriptomics. Among the successful factors of this technology, two features have had the highest impact: the capability of measuring the whole ...
GitHub

IBSEP: Integrating bulk RNA-seq and scRNA-seq data for cell-type-specific eQTLs prioritization

This repository holds the code for the paper "A unified framework for cell-type-specific eQTLs prioritization by integrating bulk and scRNA-seq data". Traditional eQTL analyses using bulk RNA ...