Cellular Neighborhood (CN) clustering based on cellular composition of each bin Spatial Cell Interaction Intensity (SCII) analysis Tissue domain clustering based on intercellular interactions within ...
Here we developed an open-source Python-based library called Python rodent Analysis and Tracking (PyRAT). Our library analyzes tracking data to classify distinct behaviors, estimate traveled distance, ...
Functional enrichment analysis is an analytical method to extract biological insights from gene expression data, popularized by the ever-growing application of high-throughput techniques. Typically, ...
Quantifying RNAs in their spatial context is crucial to understanding gene expression and regulation in complex tissues. In situ transcriptomic methods generate spatially resolved RNA profiles in ...
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