python 2.7.x (numpy, scipy, seaborn, pyBigWig, statsmodels, pysam) IEDB stand-alone (Note: IRIS is only tested on 20130222 2.15.5) Snakefile describes the IRIS pipeline. The configuration for running ...
The identification and visualization of functional elements within biological sequences offers visual presentation for biologists to integrate annotation, and also helps them to produce high-quality ...
Telomeres, the protein—DNA complexes at the ends of linear chromosomes, are protected and regulated by the shelterin molecules, the telomerase complex, and other accessory factors, among which is ...
genomepy is designed to provide a simple and straightforward way to download and use genomic data. This includes (1) searching available data, (2) showing the available metadata, (3) automatically ...
Creative Commons (CC): This is a Creative Commons license. Attribution (BY): Credit must be given to the creator. Non-Commercial (NC): Only non-commercial uses of the work are permitted. No ...
This contribution is part of the special series of Inaugural Articles by members of the National Academy of Sciences elected in 2018. Cells are the basic units of life, yet their architecture and ...
Assay for transposase-accessible chromatin using sequencing data (ATAC-seq) is an efficient and precise method for revealing chromatin accessibility across the genome. Most of the current ATAC-seq ...
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