Abstract: We present a linear time and space suffix array (SA) construction algorithm called the SA-IS algorithm.The SA-IS algorithm is novel because of the LMS-substrings used for the problem ...
Abstract: We present, in this paper, two efficient algorithms for linear time suffix array construction. These two algorithms achieve their linear time complexities, using the techniques of divide-and ...
Delta is a production-ready lossless compression system that reduces the computational and economic cost of LLM inference by eliminating redundancy in input sequences before they reach the model. It ...
Georgia Tech's online master's in computer science has taken off like a rocket ship. It is the most successful degree program in the history of higher education and we should all take important ...
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In the field of genome assembly, contig assembly is one of the most important parts. Contig assembly requires the processing of overlapping regions of a large number of DNA sequences and this ...
Aligning short-read sequences is the foundational step to most genomic and transcriptomic analyses, but not all tools perform equally, and choosing among the growing body of available tools can be ...
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Causal Structure Discovery (CSD) is the problem of identifying causal relationships from large quantities of data through computational methods. With the limited ability of traditional ...
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